Publications
Ghosh I, Nath-Sain S, Sen Gupta S, Pant Joshi C, Jain T, Subramanian S, Banerjee S, Mitra MK. COMET-LF: A Compartmental Model of Dynamics of Infection, Disease, and Elimination Strategies for Lymphatic Filariasis. 2024. preprint
Ghosh S, Banerjee M, Dhar SS, Mukhopadhyay S. Estimation of time-varying recovery and death rates from epidemiological data: A new approach. 2024. preprint
Ghosh S, Kappara D, Majumder N, Nath-Sain S, and Mukhopadhyay S. A systematic review and modelling insights of factors impacting measles vaccine effectiveness. 2024. preprint
Sam AK, Karmakar S, Mukhopadhyay S, and Phuleria HC. A historical perspective of malaria policy and control in India. International Society for Infectious Diseases Regions. 2024: 100428.
Stuart RM, Cohen JA, Kerr CC, Mathur P, National Disease Modelling Consortium of India,
Abeysuriya RG, Zimmermann M, Rao DW, Boudreau MC, Lee S, Yang L, Klein DJ.
HPVsim: An agent-based model of HPV transmission and cervical disease.
PLoS Comput Biol. Published online July 5, 2024. doi:10.1371/journal.pcbi.1012181.
Dibyachintan S, Nandy P, Das K, Vinjanampathy S, Mitra MK. Unequal lives:
a sociodemographic analysis of COVID-19 transmission and mortality in India.
Public Health. 2023;214:133-139.
Barnabas V, Kashyap A, Raja R, Newar K, Rai D, Dixit NM, Mehra S. The extent of
antimicrobial resistance due to efflux pump regulation. ACS Infect
Dis. 2022;8(11):2374-2388.
Cotta KB, Ghosh S, Mehra S. Potentiating
the anti-tuberculosis efficacy of peptide nucleic acids through combinations
with permeabilizing drugs. Microbiol Spectr. 2022;10(1):e0126221.
Ghosh S, Mukhopadhyay S, Majumder P, Wang B. Statistical
power and sample size requirements to detect an intervention by time interaction
in four-level longitudinal cluster randomized trials. Stat Med.
2022;41(14):2542-2556.
Sathish V, Mukhopadhyay S, Tiwari, R. Autoregressive and moving average models for zero-Inflated count
time series. Statistica Neerlandica. 2022;76:190-218.
Chakrabarti R, Chery-Karschney L, White J, Mascarenhas A, Skillman KM, Kanjee U,
Babar PH, Patrapuvich R, Mohapatra PK, Patankar S, Smith JD, Anvikar A,
Valecha N, Rahi M, Duraisingh MT, Rathod PK. Diverse malaria
presentations across National Institutes of Health South Asia international
center for excellence in malaria research sites in India. Am J Trop Med
Hyg. 2022;107(Suppl 4):107-117.
Acharjee A, Stephen Kingsly J, Kamat M, Kurlawala V, Chakraborty A, Vyas P, Vaishnav
R, Srivastava S. Rise of the SARS-CoV-2 variants: can proteomics be the silver
bullet? Expert Rev Proteomics. 2022;19(3):197-212.
Shivapuja S, Khamkar M, Bajaj D, Ramakrishnan G, Sarvadevabhatla RK. Wisdom of (binned) crowds: A bayesian stratification paradigm
for crowd counting. Proceedings of the 29th ACM International Conference on
Multimedia (ACMM 2021), October 20-24, 2021, Virtual Event, China. ACM, New York,
NY, USA, 9 pages.
Venkatesh A, Jain A, Davies H, Felgner PL, Rathod PK, Patankar S, Srivastava,
S. Protein arrays for the identification of seroreactive protein
markers for infectious diseases. Methods Mol Biol. 2021;2344:
139-150.
Halkare P, Punjabi N, Wangchuk J, Madugula S, Kondabagil K, Mukherji S. Label-free
detection of Escherichia coli from mixed bacterial cultures using bacteriophage
T4 on plasmonic fiber-optic sensor. ACS Sens. 2021;6(7):2720-2727.
Ghosh S, Agarwal R, Rehan MA, Pathak S, Agarwal P, Gupta Y, Consul S, Gupta N,
Ritika, Goenka R, Rajwade A, Gopalkrishnan M. A compressed
sensing approach to pooled RT-PCR testing for COVID-19 Detection. IEEE
Open J Signal Process. 2021;2:248-264.
Paul S and Venkateswaran, J. Designing robust policies under deep
uncertainty for mitigating epidemics. Computers & Industrial Engineering.
2020;140.
Guha SK, Sarkar I, Patgaonkar M, Banerjee S, Mukhopadhyay S, Sharma S, Pathak S,
Vaidya VA. A
history of juvenile mild malaria exacerbates chronic stress-evoked anxiety-like
behaviour, neuroinflammation, and decline of adult hippocampal neurogenesis in
mice. J Neuroimmunol. 2020;348:577363.
Patel YS, Mistry N, Mehra S. Repurposing
artemisinin as an anti-mycobacterial agent in synergy with rifampicin.
Tuberculosis (Edinb). 2019;115:146-153.
Mukhopadhyay S, Tiwari R, Shetty P, Gogtay NJ, Thatte UM. Modelling and forecasting Indian malaria incidence using
generalized time series models.
Communications in Statistics - Case Studies and Data Analysis.
2019;5:111-120.
Mukhopadhyay S, Sathish V. Predictive likelihood for coherent forecasting of count time
series.
Journal of Forecasting. 2019;38:222-235.
Venkatesh A, Jain A, Davies H, Periera L, Maki JN, Gomes E, Felgner PL,
Srivastava S, Patankar S, Rathod PK.
Hospital-derived antibody profiles of malaria patients in Southwest India.
Malar J. 2019;18(1):138.2.
Patankar S, Sharma S, Rathod PK, Duraisingh MT. Malaria in
India: the need for new targets for diagnosis and detection of Plasmodium
vivax. Proteomics Clin Appl. 2018;12(4):e1700024.
Srivastava S. Proteomics-based investigations of neglected and tropical
diseases. Proteomics Clin Appl. 2018;12(4):e1800076.